Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme187980g00001 GAGACTTTCTCTGAATATCCTCCACTCGGCCGTTTCGCTGTCAGAGACATGCGTCAAACTGTTGCGGTTGGTGTCATCAAGGCTGTGCAGAAGAAGGAAGCTACTGGTGCAGGAGGTAAGGTAATCACCAAGTCAGCATTGAAGAAGAAGTGA 153 0.4902 ETFSEYPPLGRFAVRDMRQTVAVGVIKAVQKKEATGAGGKVITKSALKKK 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme187980g00001 50 PANTHER ELONGATION FACTOR 1 ALPHA 1 49 - -
Trme187980g00001 50 Pfam Elongation factor Tu C-terminal domain 4 29 IPR004160 -
Trme187980g00001 50 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 29 IPR009001 -
Trme187980g00001 50 Gene3D Translation factors 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme187980g00001 Trme-Chr187980 2 154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme187980g00001 1 37 Eukaryotic Initiation Factors Gene Family AT1G07930 89.189 1.10e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme187980g00001 K03231 - psom:113310357 79.3369