Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18777g00001 GTAAACCATGTCAAAGGTCCAGCAGCAGCATCCTCATCATTGTCACCTGTCCCAAATGCTCGAGTTGCAAATGCAACATTAGGTCAAAGTCCACAAAAACTAAAGTACAGGTCTCTTTTAGCAGACATTGTACAACCACACCACCTCAAAGAGCTTTGTTCAGTTCTGGTGCTAGTATCTGGACAAGCTGCAAARACACTTGCAGACCAGAAAAGTTCAGCGGAAAAACGTACAGAAGATCAGACAGAAACTTCCCTTGCTTCTTCAACTCAAGAGCAATTGCCTAGTCAAAAAGACGTTGATGTTGAAAAAGCTATGATGGATGATGATTGTTCGAGTGCAAATCAAACAGATAAGATCAGCCCAAGTAATTCCTGTTCAGATGGTGCTGATGTCCCGAAAGGGAGGCCAATGTCTCCCGGGACTTTAGCTTTGATGTGTGATGAACAAGATACAATGTTCATGAGAGCTTCCTCTCCCATTGGGCCTATGAACCATGCTTGCAACACATCTTCGCAATTTCCTAGTGGACAAGGAGTGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTATTAACACAGTTTAGAGATTTTCTCAATAGAGTTATCACTATGGGAGAAATAAATGGTAATATTTTCCTCTCCAATAGTTAA 654 0.4174 VNHVKGPAAASSSLSPVPNARVANATLGQSPQKLKYRSLLADIVQPHHLKELCSVLVLVSGQAAKTLADQKSSAEKRTEDQTETSLASSTQEQLPSQKDVDVEKAMMDDDCSSANQTDKISPSNSCSDGADVPKGRPMSPGTLALMCDEQDTMFMRASSPIGPMNHACNTSSQFPSGQGVTEVYAEQERIVLTQFRDFLNRVITMGEINGNIFLSNS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18777g00001 217 MobiDBLite consensus disorder prediction 67 140 - -
Trme18777g00001 217 MobiDBLite consensus disorder prediction 110 128 - -
Trme18777g00001 217 PANTHER TESMIN/TSO1-RELATED 23 208 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18777g00001 Trme-Chr18777 142 1283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18777g00001 11 215 CPP Transcription Factor Family AT4G29000 50.962 2.62e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18777g00001 - - lja:Lj2g3v0796780.1 328.561