Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme187189g00001 ATGATTCTCGCTGCAGAAAGCAGCGGCGAAGATCCTGAGATGGAGATCAAAGCTCCTAAAAAACGAGCTGAAACTTGGGTACAAGATGAGACACGAAGTCTCATTGGTTTACGAAGAGAGATGGATTCACTTTTTAATACTTCGAAATCGAATAAGCATCTTTGGGAGCAAATTTCGGCGAAGATGAGAGAAAAGGGTTTTGATCGGTCACCGACTATGTGTACTGATAAATGGAGGAATCTTTTGAAAGAGTTTAAGAAAGCGAAACATCATCAAGATAGAGGTGGAAGTGGTTCTGGGAARATGAGTTGTTATAAAGAGATTGATGAGATCTTAAGAGAGAGGAGTAAGTGTGCTCAGTATAAGACTCTTACTCCTTCTTCTAAAGTTGAATCTTCTTACATGCACTTTGCTGATAAAGGTTAA 426 0.392 MILAAESSGEDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHQDRGGSGSGKMSCYKEIDEILRERSKCAQYKTLTPSSKVESSYMHFADKG 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme187189g00001 141 FunFam trihelix transcription factor GT-1 26 88 - -
Trme187189g00001 141 CDD GT1 24 89 - -
Trme187189g00001 141 ProSiteProfiles Myb-like domain profile. 18 82 IPR001005 -
Trme187189g00001 141 SUPERFAMILY Homeodomain-like 49 84 IPR009057 -
Trme187189g00001 141 Pfam Myb/SANT-like DNA-binding domain 25 111 IPR044822 -
Trme187189g00001 141 PANTHER FI21293P1 9 122 - -
Trme187189g00001 141 MobiDBLite consensus disorder prediction 1 23 - -
Trme187189g00001 141 Gene3D - 26 88 - -
Trme187189g00001 141 SMART sant 22 84 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme187189g00001 2 141 Trihelix Transcription Factor Family AT1G13450 73.973 7.06e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme187189g00001 Myb_DNA-bind_4 7.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme187189g00001 - - tpra:123907830 287.73