Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme187173g00001 ATGGCGGCGAGCGCTAAACTAATTGAAGTCCTACAAACACTCAGCGCTCAGGATTCAACCATAGAATCAAATCCAACGGCTCCACAACACGCACAAATTCACGAACTAAACGACGACGTTGTAACGACTGAGAAACGGAAAAGAGACGACGGTRACGGAAACGCCGACGCCGATGGAAAGCCTTCTCTTCACCCGATGTGGAAGACTAGTCTCTGTTCTTACTTCAGGAAACATGCTTCCTGTAGCCACGGTGATACTTGCCGTTACGCACATAGCGAGGAAGAGCTCCGGCAACGTCCGGATAACACGTGGGACCCGACTTCGGAGCGAGGGAAAAAGGCATTGAAAACTGTGACCGGTGAGAAAATTGCTGTTAAAGACGGAGTCATGATGACGGAGCTTGTTGGTGATGACG 415 0.5012 MAASAKLIEVLQTLSAQDSTIESNPTAPQHAQIHELNDDVVTTEKRKRDDGBGNADADGKPSLHPMWKTSLCSYFRKHASCSHGDTCRYAHSEEELRQRPDNTWDPTSERGKKALKTVTGEKIAVKDGVMMTELVGDD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme187173g00001 138 SMART c3hfinal6 66 93 IPR000571 GO:0046872
Trme187173g00001 138 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 67 93 IPR000571 GO:0046872
Trme187173g00001 138 Gene3D - 61 99 - -
Trme187173g00001 138 MobiDBLite consensus disorder prediction 18 63 - -
Trme187173g00001 138 PANTHER CCCH ZINC FINGER/TIS11-RELATED 39 105 IPR045877 GO:0003729
Trme187173g00001 138 MobiDBLite consensus disorder prediction 37 55 - -
Trme187173g00001 138 SUPERFAMILY CCCH zinc finger 64 98 IPR036855 GO:0046872
Trme187173g00001 138 ProSiteProfiles Zinc finger C3H1-type profile. 66 94 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trme187173g00001 zf-CCCH 8e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme187173g00001 K15332 - gmx:100777601 139.428