Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme187038g00001 TATTCAACTGGACTTGGAGTAAACGGTGGAAGTGCATTGATCCATGAATTTTATTCTCGAGAAGTACCCAATCCCATACATTTGACTGTTGACACAGGATTCACAACTGGAGGAGGTACCATAAAAGCTCATGTGTCAAACAATTTATCTCTTGGAGATAGGCAAATTGCTGCACAGTTTCAAGAAATTCCATTGGATCTTCGTATGGTTGAAGCTGAGCGAGTTGGATGTAAGCCTCTAAGCAC 245 0.4122 YSTGLGVNGGSALIHEFYSREVPNPIHLTVDTGFTTGGGTIKAHVSNNLSLGDRQIAAQFQEIPLDLRMVEAERVGCKPLST 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme187038g00001 82 Gene3D Cytidine Deaminase, domain 2 1 82 - -
Trme187038g00001 82 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 1 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme187038g00001 1 80 Eukaryotic Initiation Factors Gene Family AT2G39990 80.000 6.58e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme187038g00001 K03249 - gmx:100790913 135.961