Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186997g00001 TTCAATGTATTGGGTTTACATGAATTTGACAGTGATAGAAAAAGGATGTCAGTTATATTAGGCTACCCCGACAACTCGGTAAAACTCTTTGTCAAAGGAGCAGACACAACCATGTTTAATGTAATAGACAAATCGTACAACATGGACTTAATAAAATCCACAGAAACTCATCTTCATGCATATTCATCCCTTGGTTTAAGAACACTTGTTATCGGAATGAAAGAACTCAGCACTTCGGAGTTTGAGCAATGGCATGCAGCCTATGAAGCAGCAAGCACTGCGGTATTCGGTAGGGCTGCAATGCTCAAAAAGATTTCAAACAATGTTGAAAACAATGTTTGCATTCTAGGAGCTTCTGCTATTGAAGAT 369 0.3848 FNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTTMFNVIDKSYNMDLIKSTETHLHAYSSLGLRTLVIGMKELSTSEFEQWHAAYEAASTAVFGRAAMLKKISNNVENNVCILGASAIED 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186997g00001 123 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 3 123 IPR023299 GO:0000166
Trme186997g00001 123 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 123 - -
Trme186997g00001 123 Pfam Cation transport ATPase (P-type) 6 39 - -
Trme186997g00001 123 Gene3D - 1 123 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186997g00001 Trme-Chr186997 96 464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186997g00001 1 123 Primary Pumps ATPases AT5G04930 69.106 2.37e-54 180