Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186839g00001 ACTCTCATCGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATCACCGGCACTTCCCAAGCTGACTTTGCTGTTCTCATGATTGATTCCACTACTAGTGGTTTCAAATCTGGATGGTCTAAGGATGGCCAGACCTGGCAACATTCTACTCTTGCTTTCACTCTTGGTGTGAGGCAAATCATCTGCTGCTGCAACAAGATGGATGCTACTACACCCAGATACTCCAAGAATAGATATGATGGAATTATGAAGGTTGTTTCACCCATTTTGGTGAAGATTGGCTATAACAAAGATGATATTCCATTTGTTCCTATCTCTGGTTTTGAGGGAGATAACATTACTGAGCGCTCTTCTAATCTTGACTGGTACAAGGGTC 379 0.4327 TLIDAPGHRDFIKNMITGTSQADFAVLMIDSTTSGFKSGWSKDGQTWQHSTLAFTLGVRQIICCCNKMDATTPRYSKNRYDGIMKVVSPILVKIGYNKDDIPFVPISGFEGDNITERSSNLDWYKG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186839g00001 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 126 IPR027417 -
Trme186839g00001 126 PANTHER TRANSLATION FACTOR 1 126 - -
Trme186839g00001 126 Pfam Elongation factor Tu GTP binding domain 1 115 IPR000795 GO:0003924|GO:0005525
Trme186839g00001 126 Gene3D - 1 126 IPR027417 -
Trme186839g00001 126 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 126 IPR000795 GO:0003924|GO:0005525
Trme186839g00001 126 PRINTS GTP-binding elongation factor signature 17 28 IPR000795 GO:0003924|GO:0005525
Trme186839g00001 126 PRINTS GTP-binding elongation factor signature 61 70 IPR000795 GO:0003924|GO:0005525
Trme186839g00001 126 PRINTS GTP-binding elongation factor signature 1 11 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186839g00001 Trme-Chr186839 3 464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186839g00001 1 126 Eukaryotic Initiation Factors Gene Family AT1G07930 78.571 2.90e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186839g00001 K03231 - han:110877667 212.616