Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186799g00001 ATGACATGTCGTGTTTCCGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTCGAGTTGCTGTCTGATAAGAAGGCATTGGACCCTTCGTTTTCTTCTTATGGAAATGGTTTCAATATAGTAGCATGGGGATGCATGCTATTGAGGGAAGGAAGAGCAAAGGAGTTTTTCGCTGCAGGTTTATGGGACGCCGGACCAGAAAATGATTTGGTAGAGGTTCTTCACTTAGCAGTTGTTTGTACTGTTGACTCACTATCAACAAGACCTACAATGAAACAGGTTGTGAAAAGGCTTAAGCAACTTCAACCCCCATCATGCTAG 324 0.4352 MTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWGCMLLREGRAKEFFAAGLWDAGPENDLVEVLHLAVVCTVDSLSTRPTMKQVVKRLKQLQPPSC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186799g00001 107 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Trme186799g00001 107 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 102 - -
Trme186799g00001 107 SUPERFAMILY Protein kinase-like (PK-like) 3 100 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186799g00001 Trme-Chr186799 99 422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186799g00001 1 107 Receptor kinase-like Gene Family AT3G02130 92.523 2.95e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Trme186799g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186799g00001 - - jre:108988038 212.231