Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186658g00001 TGTGATACAGAGAAGGAAAACCTTTGCCTTTATGGATTTCCGAGTGAGCAGTGGGAGGTCAACCTGCCAGCTGAGGAAGTGCCGCCTGAGCTTCCAGAGCCTGCATTGGGTATCAACTTTGCTAGAGATGGGATGCAAGAAAAGGATTGGCTCTCTTTGGTTGCTGTACACAGCGATGCATGGTTACTTTCCGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGACAAAGCTGACAG 239 0.477 CDTEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGARFGFDKAD 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186658g00001 79 PANTHER CPG BINDING PROTEIN 1 79 IPR045104 GO:0006355|GO:0042393
Trme186658g00001 79 Pfam Alfin 1 77 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186658g00001 Trme-Chr186658 225 463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186658g00001 1 79 Alfin-like Transcription Factor Family AT5G20510 88.608 2.06e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186658g00001 K26274 - zju:107403591 164.466