Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18637g00001 ATGATTGTTAGTTTTCTTGTGCGTACAGAATCAATTTCTGTCACTGAGGCAATAAATAAATTTGCTCAGGCACGTCCCCCAGGAATTTACAAGCAGGATTATATTGACGCCCTGTACATGTTTTTTAATGAAAAGAAGCCTGAAAATCTTGTTTGTCCACAAACTCCAGAATGGAAGAGCCTCCCTGACCCTGACTATCATGGTGTGTCTGTCTCAGCTACAGACAATTATACAGACATTTTGAAGCAGGAGAATATTGTGAGGAATGAAGTAATGACAAACGATGATGTTTTGGGAGATCCTATTCCTTCAAACCAGCTACGTCCAATGCAAGAAGTTTGTTATCAACTGCTCAAGATGGGCAAAGGG 369 0.4038 MIVSFLVRTESISVTEAINKFAQARPPGIYKQDYIDALYMFFNEKKPENLVCPQTPEWKSLPDPDYHGVSVSATDNYTDILKQENIVRNEVMTNDDVLGDPIPSNQLRPMQEVCYQLLKMGKG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18637g00001 123 Gene3D Protein tyrosine phosphatase superfamily 1 76 IPR029021 -
Trme18637g00001 123 PANTHER MRNA-CAPPING ENZYME 1 122 - -
Trme18637g00001 123 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 1 59 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18637g00001 Trme-Chr18637 10 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18637g00001 1 123 Protein tyrosine phosphatase (PTP) family AT5G01290 46.032 8.21e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18637g00001 - K13917 gmx:100793183 203.371