Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186368g00001 ATGCCAAATGGAATGCTCAATGATCACCTACACCCTGCTGATGGTGTGTGCACCCTCGACTGGCCTTCAAGACTCAAAATCGCAATAGGAGCGGCTAAAGGATTTGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTAGATGAAGATTTCGAGCCCAAAATTTCCGATTTTGGCCTTGCCAGATTGATGAATCCCCTCGATACACATTTAAGTACTTTTGTAAATGGTGAATTTGGTGAATTTGGTTATGTGGCTCCTGAGTATACAAAAACACTGGTCGCTACGCCTAAGGGCGATGTTTTCAGCTTTGGGACCGTGCTTCTTGAGTTGGTGACGGGCGAAAGACCTGCAAATGTGTCTAGAGCACCAGAAACTTTTAAAGGAAATCTTGCAGAATGGATTGC 440 0.4477 MPNGMLNDHLHPADGVCTLDWPSRLKIAIGAAKGFAWLHHSCNPRIIHRNISSKCILLDEDFEPKISDFGLARLMNPLDTHLSTFVNGEFGEFGYVAPEYTKTLVATPKGDVFSFGTVLLELVTGERPANVSRAPETFKGNLAEWIA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186368g00001 147 Pfam Protein tyrosine and serine/threonine kinase 1 131 IPR001245 GO:0004672|GO:0006468
Trme186368g00001 147 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 146 - -
Trme186368g00001 147 SUPERFAMILY Protein kinase-like (PK-like) 1 136 IPR011009 -
Trme186368g00001 147 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
Trme186368g00001 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186368g00001 Trme-Chr186368 1 440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186368g00001 1 147 Receptor kinase-like Gene Family AT1G27190 54.362 1.45e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Trme186368g00001 PK_Tyr_Ser-Thr 2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186368g00001 - - psat:127076602 286.189