Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186347g00001 AGGGTGGTTGTTCTTGGTACTGGTTGGGCTGCTTGTCGGTTTCTTAAAGGGCTAGACACCAGTATTTATGATGTTGTCTGCATATCACCAAGGAATCATATGGTTTTCACTGCTTTGTTGGCTTCGACATGTGTTGGTACTCTTGAATTCAGGTCTGTTACTGAGCCTGTTGATAGAATACAGGATGCACTTGCAAGGGATCCCAACTCATATTTCTTTCTAGCTTCCTGCACTGGAATTGACACAAACAAACATGAAGTTTACTGTGAGTCAGTTACCAATGGTGGATTATCTAAAGAGCCTTATCAGTTTAA 314 0.414 RVVVLGTGWAACRFLKGLDTSIYDVVCISPRNHMVFTALLASTCVGTLEFRSVTEPVDRIQDALARDPNSYFFLASCTGIDTNKHEVYCESVTNGGLSKEPYQF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186347g00001 104 PANTHER NADH DEHYDROGENASE 1 94 IPR045024 GO:0003954|GO:0006116
Trme186347g00001 104 Pfam Pyridine nucleotide-disulphide oxidoreductase 1 94 IPR023753 GO:0016491
Trme186347g00001 104 Gene3D - 1 103 - -
Trme186347g00001 104 SUPERFAMILY FAD/NAD(P)-binding domain 1 98 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186347g00001 Trme-Chr186347 3 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186347g00001 1 104 Chloroplast and Mitochondria Gene Families AT4G21490 45.192 3.46e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186347g00001 K03885 - gmx:100814927 200.29