Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186264g00001 ATGAAGAAGAATTGTGAACTTTGCAAAGGTCCGGCTAGAACTTTCTGTGAGTCAGACCAAGCTAGCTTATGCTGGAACTGCGATTCTAAGGTTCACGGTGCTAATTTCTTGGTTGAGAGACACACAAGAACTCTCCTCTGTCACGCTTGTCAGTCTCCGACGCCGTGGAAAGCTTCCGGCGCTAGGCTCGGTAACGCGCTTTCGTTGTGTGAAAGATGCGCCGGAGGAAGAAAAGTTGATTCCGTTCAACAAAATGAAGAGAGTGAAGGTGACAATGAGGATGATGTTGAAACTGATTCCGATGAGGATTCCGATGAGGATGATGACGATGAGGATGATGTTGACGGTGATAATCAGGTTGTGCCTTGGTCTTCAACGGCGATGCCTCCGCCGGCGTCGAGTTCTTCCAGTAGCGAAGAGTCG 423 0.4917 MKKNCELCKGPARTFCESDQASLCWNCDSKVHGANFLVERHTRTLLCHACQSPTPWKASGARLGNALSLCERCAGGRKVDSVQQNEESEGDNEDDVETDSDEDSDEDDDDEDDVDGDNQVVPWSSTAMPPPASSSSSSEES 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186264g00001 141 MobiDBLite consensus disorder prediction 77 141 - -
Trme186264g00001 141 MobiDBLite consensus disorder prediction 119 141 - -
Trme186264g00001 141 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Trme186264g00001 141 SMART bboxneu5 1 46 IPR000315 GO:0008270
Trme186264g00001 141 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Trme186264g00001 141 MobiDBLite consensus disorder prediction 86 117 - -
Trme186264g00001 141 CDD Bbox1_BBX-like 5 46 - -
Trme186264g00001 141 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186264g00001 1 132 C2C2-CO-like Transcription Factor Family AT4G27310 44.311 1.19e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme186264g00001 zf-B_box 6.1e-07 No_clan