Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme186209g00001 ATGCAAAAGAGGCTAGTAGATGAAATTGGAGAAGTTATTGGTGATAGAGAGGAACGAGAAGTAAAAGAAGAAGATTTGGAGAAGTTACCGTATCTTAAGGCTGTGATTTTGGAAGGGTTAAGGCGCCACCCTCCTTCTCACTACTTAATTCCACACGCGGTGACTGAGGATGTTATTTTTAATGGTTACTTGGTGCCGAAAAATGGAACAGTTAATTTCATGGTGGCTGAGGTTGGGTGGGATTCAACAGTTTGGGAGGATCCTATGGAGTTTAAGCCAGAGAGGTTTGAGGAAAGTAGTAGTGGATTTGATGTTACTAGTCAAAATGAGATGAAGATGATGCCGTTTGGTGCAGGAAGAAGGATTTGTCCTGCTTATCATTTAGCAATGCTTCATTTGGAATATTTTGTGGCAAATTTGGTTTGGAACTTTGAATGGAAGA 442 0.405 MQKRLVDEIGEVIGDREEREVKEEDLEKLPYLKAVILEGLRRHPPSHYLIPHAVTEDVIFNGYLVPKNGTVNFMVAEVGWDSTVWEDPMEFKPERFEESSSGFDVTSQNEMKMMPFGAGRRICPAYHLAMLHLEYFVANLVWNFEWK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme186209g00001 147 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 146 - -
Trme186209g00001 147 Pfam Cytochrome P450 2 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 Gene3D Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 SUPERFAMILY Cytochrome P450 2 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 116 125 IPR017972 GO:0005506|GO:0016705
Trme186209g00001 147 PRINTS E-class P450 group I signature 113 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 PRINTS E-class P450 group I signature 74 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 PRINTS E-class P450 group I signature 33 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme186209g00001 147 PRINTS E-class P450 group I signature 123 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme186209g00001 Trme-Chr186209 1 442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme186209g00001 1 147 Cytochrome P450 AT1G64940 61.224 4.38e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme186209g00001 K24184 - gmx:100795683 243.817