Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme185673g00001 ATGCCTATTCTCCATAAATCCGCACCACAGGTGGCATTATTCTCTGCTAGAGGGCCAAATATAAAGGATTTCAGCTTCCAAGAAGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGGTGCTTGGTCTCTAAACGGAACTGATGAGCCAAATTATGATG 175 0.4286 MPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYD 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme185673g00001 58 Gene3D Peptidase S8/S53 domain 5 51 IPR036852 GO:0004252|GO:0006508
Trme185673g00001 58 SUPERFAMILY Subtilisin-like 6 50 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme185673g00001 Trme-Chr185673 205 379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme185673g00001 2 57 Subtilisin-like Serine Gene Family AT4G30020 89.286 1.28e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme185673g00001 - - lja:Lj6g3v1333200.1 119.783