Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1855g00001 GTTCGAATGATGGGAATTTATGGTGCTGGTGGAATAGGAAAAACCACATTTTCTGTTGGGAGTTTAGAGAACTTGAGCGGTGAAGAAGATGATGATGATGATGATGTTCATCATGATGATCACAATTGTGATAATATTCATCATCATGATGATCGTCGTGATATTCATCATCATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATGCACTTCAAGATACTTTAGAAACTCCAATGCCCAATGCGGAGGTGTTGGAAGCTGGGATTTTGCGCCTGTGTTCGGAGGAGGGAGGTGGATCTCAAACCAGTATGAATCTGAGCTCATAGAGAAGATTGTGAAAGACACATTGGCTAAATTAGCTCCTGCACCTGTACAAATGAACCACAAAGAAGTGAAATCAGTTTTAGATATTGTGTCTAATGATACCGTTCGAATGATGGGAATTTTTGGGGCTGGTGGAATAGGAAAAACCACATTTGCTGTTGGTAGTTTACAGAACTTGAGCGGAAAGAAAAAGAACAAGAAGAAGAAGAAGAAAAAGAACAAGAAGAATGCACATAGATG 605 0.3884 VRMMGIYGAGGIGKTTFSVGSLENLSGEEDDDDDDVHHDDHNCDNIHHHDDRRDIHHHDDEEEEEEEEEEEEEEEEEEEEEECTSRYFRNSNAQCGGVGSWDFAPVFGGGRWISNQYESELIEKIVKDTLAKLAPAPVQMNHKEVKSVLDIVSNDTVRMMGIFGAGGIGKTTFAVGSLQNLSGKKKNKKKKKKKNKKNAHR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1855g00001 201 Gene3D - 137 193 IPR027417 -
Trme1855g00001 201 MobiDBLite consensus disorder prediction 179 201 - -
Trme1855g00001 201 Coils Coil 178 198 - -
Trme1855g00001 201 MobiDBLite consensus disorder prediction 60 82 - -
Trme1855g00001 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 182 IPR027417 -
Trme1855g00001 201 Coils Coil 55 86 - -
Trme1855g00001 201 MobiDBLite consensus disorder prediction 183 201 - -
Trme1855g00001 201 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 94 174 IPR044974 GO:0006952
Trme1855g00001 201 MobiDBLite consensus disorder prediction 22 85 - -
Trme1855g00001 201 MobiDBLite consensus disorder prediction 38 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1855g00001 Trme-Chr1855 63 2887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1855g00001 110 174 WRKY Transcription Factor Family AT4G12020 43.662 6.32e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1855g00001 - - tpra:123920929 91.2781