Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme1855g00001 | GTTCGAATGATGGGAATTTATGGTGCTGGTGGAATAGGAAAAACCACATTTTCTGTTGGGAGTTTAGAGAACTTGAGCGGTGAAGAAGATGATGATGATGATGATGTTCATCATGATGATCACAATTGTGATAATATTCATCATCATGATGATCGTCGTGATATTCATCATCATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATGCACTTCAAGATACTTTAGAAACTCCAATGCCCAATGCGGAGGTGTTGGAAGCTGGGATTTTGCGCCTGTGTTCGGAGGAGGGAGGTGGATCTCAAACCAGTATGAATCTGAGCTCATAGAGAAGATTGTGAAAGACACATTGGCTAAATTAGCTCCTGCACCTGTACAAATGAACCACAAAGAAGTGAAATCAGTTTTAGATATTGTGTCTAATGATACCGTTCGAATGATGGGAATTTTTGGGGCTGGTGGAATAGGAAAAACCACATTTGCTGTTGGTAGTTTACAGAACTTGAGCGGAAAGAAAAAGAACAAGAAGAAGAAGAAGAAAAAGAACAAGAAGAATGCACATAGATG | 605 | 0.3884 | VRMMGIYGAGGIGKTTFSVGSLENLSGEEDDDDDDVHHDDHNCDNIHHHDDRRDIHHHDDEEEEEEEEEEEEEEEEEEEEEECTSRYFRNSNAQCGGVGSWDFAPVFGGGRWISNQYESELIEKIVKDTLAKLAPAPVQMNHKEVKSVLDIVSNDTVRMMGIFGAGGIGKTTFAVGSLQNLSGKKKNKKKKKKKNKKNAHR | 201 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme1855g00001 | 201 | Gene3D | - | 137 | 193 | IPR027417 | - | |
Trme1855g00001 | 201 | MobiDBLite | consensus disorder prediction | 179 | 201 | - | - | |
Trme1855g00001 | 201 | Coils | Coil | 178 | 198 | - | - | |
Trme1855g00001 | 201 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Trme1855g00001 | 201 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 142 | 182 | IPR027417 | - | |
Trme1855g00001 | 201 | Coils | Coil | 55 | 86 | - | - | |
Trme1855g00001 | 201 | MobiDBLite | consensus disorder prediction | 183 | 201 | - | - | |
Trme1855g00001 | 201 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 94 | 174 | IPR044974 | GO:0006952 | |
Trme1855g00001 | 201 | MobiDBLite | consensus disorder prediction | 22 | 85 | - | - | |
Trme1855g00001 | 201 | MobiDBLite | consensus disorder prediction | 38 | 59 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme1855g00001 | Trme-Chr1855 | 63 | 2887 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme1855g00001 | 110 | 174 | WRKY Transcription Factor Family | AT4G12020 | 43.662 | 6.32e-06 | 44.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme1855g00001 | - | - | tpra:123920929 | 91.2781 |