Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18537g00001 ATGTTGGGGAGTGTATATAGAGCGGAGCTTCCTAATGGGAAGATACTTGCTGTGAAGAAACTAGACAAAAGAGTTTCCGATCACCAAGAAGATGATGAGTTTCTTGAATTGGTAAACAATATTGACAGACTTCGGCATGCAAATATTGTCGAGCTTATCGGGTACTGTGTAGAACATGGACAAAGGCTTCTGATCTATGAATACTGCAGTAATGGGTCGATGTACGAAGCACTTCATTCAGATGACGAATTCAAAACAACACTGTCTTGGAATGCTCGCATTCGGATAGCACTTGGAGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCCAACATTCTCCTTGATGAAGATCTATCCGTGCGTGTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGCTCTGTACGTCAGCTTTCAGGACAGCTGCTAGCAGCTTATGGCTACGGGGCTCCAGAATTTGAGTCAGGAATTTATACTTACCAGAGTGATGTGTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACCGGTCGTCAGTCCTATGACAGGAAGCGACCTCGGGGTGAGCAGTTTCTTGTAAGATGGGCAATTACTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATGGAGCTTACCCTGCCAAATCTTTGTCAAATTTCGCAGACATTATTTCTAGATGTGTTCAGGTAAGCTATTCAGTATTTTTAGTCCGAAGGATCTGGATTCCCTGA 792 0.4255 MLGSVYRAELPNGKILAVKKLDKRVSDHQEDDEFLELVNNIDRLRHANIVELIGYCVEHGQRLLIYEYCSNGSMYEALHSDDEFKTTLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGSVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRKRPRGEQFLVRWAITQLHDIDALSRMVDPSLNGAYPAKSLSNFADIISRCVQVSYSVFLVRRIWIP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18537g00001 263 Pfam Protein tyrosine and serine/threonine kinase 3 198 IPR001245 GO:0004672|GO:0006468
Trme18537g00001 263 SUPERFAMILY Protein kinase-like (PK-like) 3 252 IPR011009 -
Trme18537g00001 263 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 69 254 - -
Trme18537g00001 263 PANTHER OS01G0253100 PROTEIN 2 250 - -
Trme18537g00001 263 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme18537g00001 263 Gene3D Phosphorylase Kinase; domain 1 1 68 - -
Trme18537g00001 263 Gene3D Transferase(Phosphotransferase) domain 1 69 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18537g00001 Trme-Chr18537 31 1308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18537g00001 1 249 Strubbelig Receptor Gene Family AT4G03390 81.526 1.74e-151 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trme18537g00001 PK_Tyr_Ser-Thr 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18537g00001 - - mtr:25487613 471.855