Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme185181g00001 ATGCTTTCTAAGATATATCGAGATAGGGATTTTGACATACTCAATGTGCAAGAAGGAATTTCAGTGATGAGGAAAATTCTCTACCAAAAAAAGGTTCTATTGGTTCTTGACGATGTTGACAATATGGAGCAGCTACAAGCTATTGCAGGAGCATCTGATTGGTTTGGTCTTGGAAGCAGAGTCATCATTACAACTCGGGACAATAGTTTGCTAGCAAAGCATGGGGTTGGATTTAGAAAAACATATCAGGTAGAGGAATTAAGCGAAAAAGAAGCTCTTGATTTGCTTAGTTGGTATGCTTTCAAGACCGACAAAGTAGTTGATCCAAGCTATGCACCAGTTTTAAAACGTGCATTGGCCTATGCTTATAGGCTTCCACTGGCTTTACAAGTAGTAGGCTCCAACTTGTTTAAAAAAAGTATAAATTAA 429 0.38 MLSKIYRDRDFDILNVQEGISVMRKILYQKKVLLVLDDVDNMEQLQAIAGASDWFGLGSRVIITTRDNSLLAKHGVGFRKTYQVEELSEKEALDLLSWYAFKTDKVVDPSYAPVLKRALAYAYRLPLALQVVGSNLFKKSIN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme185181g00001 142 Gene3D - 86 142 IPR042197 -
Trme185181g00001 142 Gene3D - 1 76 IPR027417 -
Trme185181g00001 142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 139 IPR044974 GO:0006952
Trme185181g00001 142 PRINTS Disease resistance protein signature 26 40 - -
Trme185181g00001 142 PRINTS Disease resistance protein signature 122 136 - -
Trme185181g00001 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 141 IPR027417 -
Trme185181g00001 142 Pfam NB-ARC domain 20 139 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme185181g00001 Trme-Chr185181 13 441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme185181g00001 20 139 WRKY Transcription Factor Family AT5G45050 37.500 5.89e-15 68.9