Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18490g00001 TTTTATGATGGACCAGTTGATGGATCTGAAACGGCATTTGGTGGAGACAACAATGATGGTTCAACAGGATTAAGTAGCACTGACCAAGCCGTATCGAAAACAAAGCCAAGGAACGATATACTGGACTCGGTTTTCACTGCACGCCTTGTTGAGCTTTTAAAGTGCTCTTCACCCAGTTTACAAGAAAAGGCTGCATCTGTTCTGGAGTTTGTGGCATTGGCGGACCCAACACTGACTCCAATTATATCTGTGGATATTGAAAATGGTCTCAATTCTGCTTTTCAGCAAAATTTCTTGAAAATTTCAGCAGACACAGAATCTGATGTGGAAGATCAGTTTTCAGCGGCATATGCTATTAAACTTGAAGAAGCTGGTCTTGCAATATCTGCAACATCCCGGTTACTGACAAGACTACTTGACTCTAAGCAGTTTTGCGACAAATTAAATTTCTCCCATTTCATTGACACGCTCCGCGAAATCCTCAAATCCAATATTCCCCTACACAGCAAAGATTGGGTAGCTGCTTGTCTAGTTAAACTGAGTTCTCTCTCTGGTTACGACACGAGTTCTAATCCAATCAATGTGGAAGTTACACTCTATGAGAAAATTCCAAGACTTATAGAACAGATCAAAACTTCATTCTCCTTAGAAGCACAGGAAAATGCTGTTGTAGAACTTAATAGAATAGTATCTGAAGGGGTGGTAGATTCCACCGGAGCTATTATTTCTGAAGGGGCGGTGTATCCTTTGGTGAAACTGATTGAAGAAGGCAGTGAAAGAGGTGTTGAAGCAAGCTTGACAATACTATATAATCTGAGTATGGACAGTGAGAACCATGCAGCACTTGTAGCTGCTGGAGCAGTTCCAGCCTTAAGAAGAATTGTTCTGTCAGAAAAACCA 900 0.4122 FYDGPVDGSETAFGGDNNDGSTGLSSTDQAVSKTKPRNDILDSVFTARLVELLKCSSPSLQEKAASVLEFVALADPTLTPIISVDIENGLNSAFQQNFLKISADTESDVEDQFSAAYAIKLEEAGLAISATSRLLTRLLDSKQFCDKLNFSHFIDTLREILKSNIPLHSKDWVAACLVKLSSLSGYDTSSNPINVEVTLYEKIPRLIEQIKTSFSLEAQENAVVELNRIVSEGVVDSTGAIISEGAVYPLVKLIEEGSERGVEASLTILYNLSMDSENHAALVAAGAVPALRRIVLSEKP 300
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme18490g00001 300 Gene3D - 22 300 IPR011989 -
Trme18490g00001 300 MobiDBLite consensus disorder prediction 14 34 - -
Trme18490g00001 300 MobiDBLite consensus disorder prediction 1 34 - -
Trme18490g00001 300 SUPERFAMILY ARM repeat 34 296 IPR016024 -
Trme18490g00001 300 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 300 - -
Trme18490g00001 300 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 245 287 IPR000225 GO:0005515
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18490g00001 203 295 U-box Gene Family AT2G28830 37.234 8.26e-09 54.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18490g00001 - - gmx:100810447 419.083