Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme184500g00001 ATGAAGAACGCCGATCAGGCTCTTTTATCTGGATGCTCTGCGGGTGGTCTGGCATCTATACTACATTGTGACGAGTTCCGTAGTTTGCTTCCAAAATCTACCAAAGTGAAGTGTTTAAGTGATGCGGGATTTTTTCTTGATGCAACTGATGTCTCTGGCGGGCACACATTGAGGAACCTGTTTGGAGGTGTTGTTAACTTACAG 204 0.451 MKNADQALLSGCSAGGLASILHCDEFRSLLPKSTKVKCLSDAGFFLDATDVSGGHTLRNLFGGVVNLQ 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme184500g00001 68 PANTHER NOTUM-RELATED 1 68 IPR004963 GO:0016787
Trme184500g00001 68 Pfam Pectinacetylesterase 1 68 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme184500g00001 Trme-Chr184500 51 417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme184500g00001 1 68 Carbohydrate Esterase AT3G62060 82.353 2.93e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme184500g00001 K19882 - zju:107426209 126.331