Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme184428g00001 GACTACCTAAAAGATGACTGCCTATCTGTAAATTGTAGTGTTGGTGTTGTGAGGTCACACACGGAGGGCCCGAAGATATATTCCATTGCAATACCACCTTCTAACATTGGTCACCAATTTGGTCAACTGCTGGAAAGTGGTAAAGGAAGTGATGTGAGTTTTGAAGTGGATGGGGAAGTTTTCACTGCTCATAAATTGGTGCTAGCAGCTCGTTCTCCTGTTTTCAGAGCCCAGCTTTTTGGTCCTATGAAAGATCACAATACCAAGTGTATTAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGTTTACTTAATATTTTGCTTAATATCTTAA 336 0.4018 DYLKDDCLSVNCSVGVVRSHTEGPKIYSIAIPPSNIGHQFGQLLESGKGSDVSFEVDGEVFTAHKLVLAARSPVFRAQLFGPMKDHNTKCIKVEDMEAPVFKVYLIFCLIS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme184428g00001 111 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 2 107 IPR045005 GO:0016567
Trme184428g00001 111 SUPERFAMILY POZ domain 27 108 IPR011333 -
Trme184428g00001 111 ProSiteProfiles BTB domain profile. 50 111 IPR000210 GO:0005515
Trme184428g00001 111 Gene3D Potassium Channel Kv1.1; Chain A 17 109 IPR011333 -
Trme184428g00001 111 Pfam BTB/POZ domain 41 103 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme184428g00001 Trme-Chr184428 1 336 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme184428g00001 BTB 1e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme184428g00001 K10523 - aew:130761338 194.897