Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18439g00001 ATGTCTTTATTGTATTTGCAGGCAACCAAGAAAATAGCAGATGCTAAATTGGCGAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTGCAGCTGAGAGGGAGACAGCTTACACTCCTTTTGTTCCACAAGCAGTTCAGCCATCCAGCTATACAGTCAGCGAAGCAGGTGTTAGTTCCGATAAAAGTCAAGAACAGCAGGCCCTTCTTGTGGAATCCAGAAGGTATTTTTTGTACCTTACTTCCTAG 261 0.433 MSLLYLQATKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVQPSSYTVSEAGVSSDKSQEQQALLVESRRYFLYLTS 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18439g00001 86 Gene3D - 4 46 - -
Trme18439g00001 86 SUPERFAMILY t-snare proteins 9 71 IPR010989 GO:0016020|GO:0016192
Trme18439g00001 86 Pfam Syntaxin-like protein 9 42 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18439g00001 Trme-Chr18439 846 1241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18439g00001 10 84 SNARE and Associated Proteins AT4G17730 72.000 1.79e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18439g00001 - - twl:119986785 125.176