Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme184394g00001 TCCAACTCGGAATCAGATAAATTGATCACCACATCTCATGTCAGTAAGTTGATCGAAGATCTACAGAGTCAATCAAATGAAACACAAGCTGCTGCTGCTGAAGAATTGCGACTCCTTACCAAGTTTAACATGGAAAACCGTATCATTGTAGGGCAATGTGGGGCTATCATGCATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTGTGACAGCAATACTGAATTTGTCGATTAATGAAGACAACAAGACCTTGATCATGGAAGCAGGAGCCATAGAACCACTTATCTATGTTTTGAAGACAGGAAATAACTGTGCCAAGGAAAATTCTGCTGCAGCTCTATTCAGCCTCTCGGTACCAGAAAACAATAAGGCGAAAATTGGTCGTTCCGGTGCTATTAAAGCGTTAGTGGAACTTCTAGCTTCTGGAACTCTTAGAGGGAAGAAAGATGC 467 0.3747 SNSESDKLITTSHVSKLIEDLQSQSNETQAAAAEELRLLTKFNMENRIIVGQCGAIMHXXXXXXXXXXXXXXXXVTAILNLSINEDNKTLIMEAGAIEPLIYVLKTGNNCAKENSAAALFSLSVPENNKAKIGRSGAIKALVELLASGTLRGKKDA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme184394g00001 156 PANTHER U BOX DOMAIN-CONTAINING 13 156 - -
Trme184394g00001 156 SUPERFAMILY ARM repeat 14 153 IPR016024 -
Trme184394g00001 156 Gene3D - 2 156 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme184394g00001 12 156 U-box Gene Family AT2G23140 57.241 1.31e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme184394g00001 - - psat:127126040 219.55