Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18425g00001 ATGGAGCTGAAAGCTTCATCTCCAAAGCCAGAGTCTGTTGCGCCATCTGATTGTGCCAGTGATCCTGAAGAAACGGAAGTGAGCGATGACGATGATGATGATCGGAATCATAAGCATCGGAAGAAGGAAGATCATTCTCAATCATTAGAGAGAGATGTTTCAGATCCTGTAATTAACAGGCCATTCAGGAAGCGTAACAAAAATTTTGGGAATCATCATCCGTTCAGAGAAAACGAATCTATGACCTTTGAAACAATGAAAACTTACAGTGATGCCACCACAGATAGAGATTTTTACTCCAAGTTTGAAAGAAGGCGCCCTGGGATGACTTCAGTTCCCCGAACACCTTTTGATATGAGTCAAAGAATACGACCAAACCAATCATTTGCTGGAGATCCCGGCGCTGGTAGGGGAAGAGGCAGGGAATCTGGTTTTTGGAATCAACGTGAATCTAGGTTCAGCTCAATGGATGTTGCTTCACAAATGGTTCAGCAGGGACCCATTCATCCAGCCCTTTATACTGGACGTGGGTTACCAAATATATCAAATGCACAAAATGCATCTTGGAATACATTCGGTTTAATTCCAGCAGTACCCAATGGTGGCTTAGACATGCTTCATCCAATGGGTTTACAAGGAACGCTCAGACCACCTATTAATTCATCTATAAATGTGAATATTCCTCGTCAACGATGCAGAGATTTTGAGGAACGTGGATTTTGCCTTAGAGGGGACATGTGCCCTATGGAACATGGTGTAAATCGAATTGTCATTGAAGATGTTCAGAGCCTTCAGTTATAG 801 0.4282 MELKASSPKPESVAPSDCASDPEETEVSDDDDDDRNHKHRKKEDHSQSLERDVSDPVINRPFRKRNKNFGNHHPFRENESMTFETMKTYSDATTDRDFYSKFERRRPGMTSVPRTPFDMSQRIRPNQSFAGDPGAGRGRGRESGFWNQRESRFSSMDVASQMVQQGPIHPALYTGRGLPNISNAQNASWNTFGLIPAVPNGGLDMLHPMGLQGTLRPPINSSINVNIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVIEDVQSLQL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18425g00001 266 SMART c3hfinal6 227 253 IPR000571 GO:0046872
Trme18425g00001 266 MobiDBLite consensus disorder prediction 31 62 - -
Trme18425g00001 266 SUPERFAMILY CCCH zinc finger 223 252 IPR036855 GO:0046872
Trme18425g00001 266 ProSiteProfiles Zinc finger C3H1-type profile. 226 254 IPR000571 GO:0046872
Trme18425g00001 266 MobiDBLite consensus disorder prediction 1 77 - -
Trme18425g00001 266 PANTHER RNA RECOGNITION RRM/RNP DOMAIN 6 263 IPR045137 -
Trme18425g00001 266 MobiDBLite consensus disorder prediction 98 144 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trme18425g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18425g00001 K13192 - gmx:100802396 464.922