Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme183949g00001 ATGAAGTATAGCTGTCAGGCGAAGATCCACGTCGGAAATGACTCCGACGGTTGTACAGTGACGGAGAATGAGCGACCAGAGATTCATGAATCGGTTGAGATATCNNNNNNNNNNANNNNNNNNNNATCATCATCGGAGGAGGAAGATCGGACCTCGAAGCGAAATGGAACAGAAGTTCTATCGTACGGTATGGTGTCGACGATAGGGACTAGGAAGGAAATGGAGGATGCTGTGAGTGTGGAGATAGGTTTTGCGGTTAAGGATGGTGAAAAGTGTGATTTCTTCGGTGTTTACGACGGTCACGGCGGAGCTCAGGTTGCGGAAAAGTGTAGAGAGAGATTGCATCGGGTTGTGGCGGAGGAAGTGGACAGGTGTGGGAAGGATGATGAATGGGATTGGGAAAGAGTAATGGAAGGGTGTTTTGGTAAAATGGATGGAGA 440 0.4636 MKYSCQAKIHVGNDSDGCTVTENERPEIHESVEISXXXXXXXSSSEEEDRTSKRNGTEVLSYGMVSTIGTRKEMEDAVSVEIGFAVKDGEKCDFFGVYDGHGGAQVAEKCRERLHRVVAEEVDRCGKDDEWDWERVMEGCFGKMDG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme183949g00001 146 ProSitePatterns PPM-type phosphatase domain signature. 94 102 IPR000222 GO:0043169
Trme183949g00001 146 PANTHER PROTEIN PHOSPHATASE 47 145 IPR015655 GO:0004722|GO:0006470
Trme183949g00001 146 Gene3D - 56 146 IPR036457 -
Trme183949g00001 146 ProSiteProfiles PPM-type phosphatase domain profile. 61 146 IPR001932 -
Trme183949g00001 146 MobiDBLite consensus disorder prediction 12 58 - -
Trme183949g00001 146 Pfam Protein phosphatase 2C 62 127 IPR001932 -
Trme183949g00001 146 SUPERFAMILY PP2C-like 57 145 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme183949g00001 Trme-Chr183949 31 470 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme183949g00001 57 145 PP2C-type Phosphatase Gene Family AT3G11410 44.944 6.57e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme183949g00001 K14497 - gmx:100807235 167.548