Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme183766g00001 ATGGCGGTTTCTCCGTCGGTCGCCGCCACTCCGGCTTCTCTTTACGTCGGCGATCTTCATCCCGATGTCTCCGACGGACAACTTCATGAAGCTTTCTCCGATTTCAAGACTCTCGCTTCCGTTCGCATTTGTAGAGACTCTTCTACCGGACGCTCACTCTGTTATGGCTATGTCAACTTCCTTTCTCCTCAAGA 194 0.5206 MAVSPSVAATPASLYVGDLHPDVSDGQLHEAFSDFKTLASVRICRDSSTGRSLCYGYVNFLSPQ 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme183766g00001 64 Gene3D - 2 64 IPR012677 -
Trme183766g00001 64 PANTHER GEO13361P1-RELATED 10 63 - -
Trme183766g00001 64 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 62 IPR000504 GO:0003723
Trme183766g00001 64 SUPERFAMILY RNA-binding domain, RBD 7 63 IPR035979 GO:0003676
Trme183766g00001 64 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 64 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme183766g00001 12 64 Eukaryotic Initiation Factors Gene Family AT2G36660 69.811 3.24e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme183766g00001 K13126 - zju:107432034 108.227