Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18343g00001 GGTTTTAGAAAGGTTGACCCTGATCGCTGGGAATTTGCACATGAAGGATTTTTAAGGGGCCAAAAACAATTGTTGAAGACTATCACTAGGAGGAAATCTACTCATGCAAATGGTAATAGTCAGCAACCATCTAAGGTGCAGAACCCACCTGTTGGGTCATGTGTTGAAGTGGGGAAGTTTGGGATTGACGAAGAGGTTGAAAGACTGAAACGGGATAAAAATGTTCTTATGCAGGAACTTGTTAGGTTAAGACAGCAACAACAAACAACCGATAACCAATTGCAAAATGTTGGGCAACGTGTGCAAGTGATGGAGCAGCGTCAACAACAGATGATGTCGTTCCTGGCAAAGGCCATGAATAGTCCGGGCTTCATGGCTCAATTTTCACAGCAGCAGAATGAAAGTAATAGACATGTTACCGCAGTTAAAAAGAGGCGGCTCCAGAGACAGGAAGAAGATAATTTAGCCACCAAGAATCCGCATAATCCTCTGGATGGACGTGTTGTCAAGTACCAGCCTTCGGTTAATGAGGCTGCTAAAACATTATTTAGCCAGATATTGCAAATGAACAATTCTACAAGGATGGACTCTTCCATTAAGAACCTTGATGCATTCCTTATTGATGATATTCCTTCAGCCATTCCATTAGATAGCAGTAGTTCCTCCACCCAAGTTTCTGGTGTAACGCTTTCTGAGGTTCCCCCTATTTCTGGGCAGTCGTGCATGGCAGTAGAATCTCAATTTCCTGTTAGTTGTATGACCAGTAGCATGTCTGAGGTACAATCTTCACCTGCTGTGTTGACTGACTGTGTCAATGCAGCTGAGTTTCCTGAATTAACAGCACATAACTGTCAAGACAATGTTTTGGATTTTGGTAAAGTTGAAGGGATGGCTACAGAAAGCAGCTTCGTCA 913 0.4294 GFRKVDPDRWEFAHEGFLRGQKQLLKTITRRKSTHANGNSQQPSKVQNPPVGSCVEVGKFGIDEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQNVGQRVQVMEQRQQQMMSFLAKAMNSPGFMAQFSQQQNESNRHVTAVKKRRLQRQEEDNLATKNPHNPLDGRVVKYQPSVNEAAKTLFSQILQMNNSTRMDSSIKNLDAFLIDDIPSAIPLDSSSSSTQVSGVTLSEVPPISGQSCMAVESQFPVSCMTSSMSEVQSSPAVLTDCVNAAEFPELTAHNCQDNVLDFGKVEGMATESSFV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18343g00001 304 Coils Coil 66 86 - -
Trme18343g00001 304 MobiDBLite consensus disorder prediction 31 49 - -
Trme18343g00001 304 MobiDBLite consensus disorder prediction 31 52 - -
Trme18343g00001 304 MobiDBLite consensus disorder prediction 147 167 - -
Trme18343g00001 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 224 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18343g00001 Trme-Chr18343 494 1406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18343g00001 1 241 HSF AT5G16820 60.905 2.52e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18343g00001 K09419 - qsa:O6P43_001765 368.622