Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme183399g00001 ATGGAAATTTATGTTGATGATGAAGCCAAGTTAACCCTTCATGGACTTGTGCAGCACTACATCAAACTGAAAGAGGAGGAGAAAAACCGCAAGTTGAATGATCTTCTTGATGCGCTAGACTTCAACCAAGTTGTTATCTTTGTGAAAAGTGTCAGTAGAGCAGCTGAGCTGGACCGACTACTTATTGAGTGCAATTTTCCATCAATATGCATTCACTCTGGCATGTCCCAGGAAGAAAGGTTTGTTTTATTAGATGTCGGTCGATGCTGA 270 0.4111 MEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERFVLLDVGRC 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme183399g00001 89 Gene3D - 12 86 IPR027417 -
Trme183399g00001 89 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 84 IPR027417 -
Trme183399g00001 89 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme183399g00001 Trme-Chr183399 44 406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme183399g00001 1 82 Eukaryotic Initiation Factors Gene Family AT5G11170 91.463 3.55e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme183399g00001 K12812 - psat:127112384 154.451