Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18335g00001 ATGGTGTGCATTAGGTATACAGCTTTAGTGGAACAAAATGTACTGCAAGCTGCAAAGGACATGGAAAAAGTACTAGATGTTGCAATGAGCCAAATAGCCGAAGAAGATCCGTTACCACCAACCAATAATGCTGTATATCCACTTCTTTCAAGAGAATTCTTGCGTCGACACGGTCGCGATCTTTTCGCATGTTCTACTAATTGGTTTCTATTGGACATAGTGTTCTACAGTCAAGTTCTATTTCAAAGTGAAATATACAAACGATACCTCAAACACAAAGATGAACAAGATGTGTACCAAGAGGCTTTCTATCTCGCAAGAATCCAAGCCATTCTTGCTGTTTGTTCCACAATTCCTGGCTACTTCTTCACCGTCTACTTCATCGATCGTATAGGACGGGTTAAAATACAAATGATAGGTTTTTTCTTTATGGCAGTGTCATTTTTTGCTATAGGGATTCCCTATTACTCTCATTGGACTAATGCCGAAAACAAAGATAATAAANNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTCTTTGCAAATTTTGGACCTAACACCACCACTTTTATTGTTCCGGCCGAACTCTTTCCGGCTAGGTTTAGGTCAACATGTCATGGTATTTCTGGAGCTGTTGGTAAGGTTGGTGCGATCATTGGATCTGTTGGATTTCTATGGGCTTCACATAAAGTAAAGGAGGAAGGATATCCTAAGGGAATTGGAATGGAAGCATCCCTTATCATACTTGGAGGGGTGTGCATAGTGGGAATGTTTGTTACTTACTTTTTCACCAAGGAAACCATGGGAAGGTCTTTGGAAGAGAATGAGGTTGAGCAGTCTCATCATGCTGAAGAATAT 858 0.3869 MVCIRYTALVEQNVLQAAKDMEKVLDVAMSQIAEEDPLPPTNNAVYPLLSREFLRRHGRDLFACSTNWFLLDIVFYSQVLFQSEIYKRYLKHKDEQDVYQEAFYLARIQAILAVCSTIPGYFFTVYFIDRIGRVKIQMIGFFFMAVSFFAIGIPYYSHWTNAENKDNKXXXXXXXXXXFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKVKEEGYPKGIGMEASLIILGGVCIVGMFVTYFFTKETMGRSLEENEVEQSHHAEEY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18335g00001 286 Gene3D MFS general substrate transporter like domains 43 286 IPR036259 -
Trme18335g00001 286 Pfam Sugar (and other) transporter 103 276 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trme18335g00001 286 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 274 - -
Trme18335g00001 286 SUPERFAMILY MFS general substrate transporter 37 276 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18335g00001 Trme-Chr18335 1 858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18335g00001 5 278 Inorganic Solute Cotransporters AT1G76430 59.857 2.65e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18335g00001 K08176 - gmx:100797683 448.358