Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme183107g00001 ATGGCTACAAATACTGAGAAAATGAAAAGGCCTTTTATTGAGATTTCTTTCAAAGATCTGACTCTCACACTTAAATCTCGAAACAAACATATATTGAGAAATGTTACGGGGAAAATCAAACCTGGCCGTATCACTGCTGTCATGGGTCCGTCAGGGGCTGGCAAGACAACATTTCTTTCAGCTCTAGCAGGAAAGGCATTTGGATGCCTGGTTAATGGTTCAATTCTTATAAATGGAAGGCATGAATCAATTCANNNNNNNNTNNNNNNNNNNGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACTTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAGTGCAG 350 0.3886 MATNTEKMKRPFIEISFKDLTLTLKSRNKHILRNVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCLVNGSILINGRHESIXXXXXXXGFVPQDDVVHGNLTVEENLWFSAQC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme183107g00001 116 Gene3D - 13 116 IPR027417 -
Trme183107g00001 116 Pfam ABC transporter 32 112 IPR003439 GO:0005524
Trme183107g00001 116 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 116 - -
Trme183107g00001 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme183107g00001 Trme-Chr183107 38 387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme183107g00001 14 116 Calmodulin-binding Proteins AT2G36910 26.168 7.45e-07 44.7