Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme182g00001 ATGGGGGGCACCGGAAAAACTACATTGGCCAGAGAAGTGGGAAAAGAACTAAAGCAATCTGGACAGTTCACTCATGTCATTGTTACAACAGTGTCATTTACTCATGATTTAAAAAAGATTCAAGATGAAATTGCTGGACCTTTAGGATTGAAATTTGAGAATTGTAATGAATCAGACCGACCTGGAAAACTTTGGAATAGGTTAACAAATGGAGAGAAAATTCTTCTGATAATGGATGATATGTGGGATGAAAACCCACCTGATTTTGATGCCATAGGGATTCCAAAACAGGACAATCACAAAGGTTGCAGAGTTCTTGTAACCACACGCAGTAAACAAGTATTCAAAGACATCAATTTTAGTATCAGTATTGAACTGGAGCTATTATCTGAAAAAGATGCATGGAGCATGTTCAAAACTTATGCTGGTATAAGCAAAAGTTCCTCAAATAATGTGATTCGTAAGGCACGTGAAATAGCAAAGGAATGCAAACAATTACCAGTTGCAATTGCAGTTACCGCCGGAAGTTTGAAAGGCCAACAACAACGAGTGCATGAGTGGGATGTGGCATTAAAATCCTTGAAGAATCCTGCATCCATGCAAGGTGTTAATGCTGATATGGTTGGAATTTATAATTGTCTAAAGTTTAGCTATGATTACATGAAGGATGAAAAAGCCAAGAGATTGTTTCTTTTATGTTCTGTATTCCCAGAAGATAAAGAAATTTCTAATGAAGTTCTAGCCAGACTCTGCATAGGAGCGGGTATTTTTGGGGAAAATCATGACGAAAATCATGACATCTATGATGCTGCTCGAGACCAAGTATTTGTAGCCAAAGATAGACTCGTAGATTCTTGTTTGTTGTTGGAGGTCGACAAAAAACATGTAAAAATGCATGATTTGATTCGTGATGTTGGTCAATGGATAGCGAAGAAAGAGATTCAAGAATTAAATTTGTCTAACAAAAATCAAAAGTTGTTGGTTGAAAGGGAAACAAATATTATGTGTGTATCATGTAAAGGGAAGGGCATGGATTTGTTTTCTTGTAAATTTGCTGATGGTTCCAAACTTGAGACTCTAATTGTCATTGTGGATAGAGATGGACACTACGAAGGTCCGGAAGTCCCAAATTCTTTCTTTGAAAATATTGTTAAGCTTCGAGTTTTGTATTTTTTAGGTGATTACGGCCTATCACTACCATTACCTAATTCAATCCAGTCATTGAGTAATATTCGATCTGTGTTGGTTCATAAGTTGAATTTAGGTGACATCTCTGTTTTGGGAAACCTGCAAAGTCTTGAGACTCTTGATTTGGATAATTGCACAATCAATGAATTGCCAAATGAAATTACAAAATTGGAGGAGTTCAAATTGTTGAACTTGAATGATTGTGAAATTGAAAAGAATAATCCATTTGAAGTTATTGAAAGATGTTCATCACTTGAAGAGTTGTATTTCATAGACAGTTTTAATGATTTCTGTCGAGAAATAACCCTACCAGAATTGCAAAGGTATCGTATTCATGAAGGGTCATTTTACAAAGCAGAGTTTAATGATATAATGGAAGATTCCCTAAAATATGTGGTTTTGAAAGGGGATGCTGATAAGGAGTATTATTTTTCACGAAGAACACTCAAGTTTTGTATGAATGATCTTGTTGTGCTTTGTTTGAGATATGATTCACATCTACAGTGCCTCATAGACACCAAACTTGATGATTCTGAAGTACCAATTGTTTTCTCTCAGTTGGTTTCTCTAGACCTCATGGATATGAAAAATTTGGAAGAATTATGCACTGGTCCCATCTCCCTTGTCTCTTTGAACAATTTAGAGGAACTATTTATCTCGAGCAACTTCTCGAAGCCTACTATTGTTGGAGACCTTGATAATATTTGA 1896 0.3581 MGGTGKTTLAREVGKELKQSGQFTHVIVTTVSFTHDLKKIQDEIAGPLGLKFENCNESDRPGKLWNRLTNGEKILLIMDDMWDENPPDFDAIGIPKQDNHKGCRVLVTTRSKQVFKDINFSISIELELLSEKDAWSMFKTYAGISKSSSNNVIRKAREIAKECKQLPVAIAVTAGSLKGQQQRVHEWDVALKSLKNPASMQGVNADMVGIYNCLKFSYDYMKDEKAKRLFLLCSVFPEDKEISNEVLARLCIGAGIFGENHDENHDIYDAARDQVFVAKDRLVDSCLLLEVDKKHVKMHDLIRDVGQWIAKKEIQELNLSNKNQKLLVERETNIMCVSCKGKGMDLFSCKFADGSKLETLIVIVDRDGHYEGPEVPNSFFENIVKLRVLYFLGDYGLSLPLPNSIQSLSNIRSVLVHKLNLGDISVLGNLQSLETLDLDNCTINELPNEITKLEEFKLLNLNDCEIEKNNPFEVIERCSSLEELYFIDSFNDFCREITLPELQRYRIHEGSFYKAEFNDIMEDSLKYVVLKGDADKEYYFSRRTLKFCMNDLVVLCLRYDSHLQCLIDTKLDDSEVPIVFSQLVSLDLMDMKNLEELCTGPISLVSLNNLEELFISSNFSKPTIVGDLDNI 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme182g00001 631 Gene3D - 217 307 IPR036388 -
Trme182g00001 631 Gene3D Ribonuclease Inhibitor 310 631 IPR032675 -
Trme182g00001 631 Gene3D - 1 123 IPR027417 -
Trme182g00001 631 Pfam NB-ARC domain 1 219 IPR002182 GO:0043531
Trme182g00001 631 Gene3D - 129 216 IPR042197 -
Trme182g00001 631 PRINTS Disease resistance protein signature 428 444 - -
Trme182g00001 631 PRINTS Disease resistance protein signature 163 177 - -
Trme182g00001 631 PRINTS Disease resistance protein signature 68 82 - -
Trme182g00001 631 SUPERFAMILY L domain-like 297 619 - -
Trme182g00001 631 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 616 - -
Trme182g00001 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 233 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme182g00001 Trme-Chr182 2854 4940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme182g00001 1 471 WRKY Transcription Factor Family AT5G45050 24.769 4.05e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme182g00001 - - vvo:131629101 784.252