Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme182191g00001 ATGCATCCAACAGCTCCTATACTAGTTCGCAAATCTGGTTCCGAGGCTGACTTATGTGGCTTCAGGGTACCGAAAGATACACTAGTTCTTGTTAATGTATGGAGCATGGGAAGGGACTCAAGTATTTGGACCGACCCAAATTTGTTTTTGCCCGAAAGGTTTTTAGAAAGCGGAGAAGATTTTATAGGAGAAGATTTTGGGTTCATTCCCTTTGGAGCTGGTAGAAGAATGTGTTCTGGAGTTCCGTTTGCTCATAGGGTTGTGCATAATATGCTGGCCACTTTGCTTTACCATTTTGATTGGAAGCTAGCTGACGGGGAGAAAATTGAAGAAATGGACATGACTGAAAAATTTGGAACTACTTTGCATAAAGTCAAACCTCTTATGGTTATTCCTGTCAAAGAATGA 408 0.4118 MHPTAPILVRKSGSEADLCGFRVPKDTLVLVNVWSMGRDSSIWTDPNLFLPERFLESGEDFIGEDFGFIPFGAGRRMCSGVPFAHRVVHNMLATLLYHFDWKLADGEKIEEMDMTEKFGTTLHKVKPLMVIPVKE 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme182191g00001 135 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 134 - -
Trme182191g00001 135 SUPERFAMILY Cytochrome P450 1 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme182191g00001 135 Gene3D Cytochrome P450 1 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme182191g00001 135 PRINTS E-class P450 group I signature 32 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme182191g00001 135 PRINTS E-class P450 group I signature 78 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme182191g00001 135 PRINTS E-class P450 group I signature 68 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme182191g00001 135 Pfam Cytochrome P450 1 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme182191g00001 Trme-Chr182191 12 419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme182191g00001 1 135 Cytochrome P450 AT2G45550 53.676 7.51e-47 156