Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18215g00002 ATGATTCCGCCTCTTGAAGAGGATTATTTCGGAAATGCAGCGCTTATTGGTGTTATGGCGATGAAAGCCGGGGAACTTCTGGAGTGTGGGATCGGAAAAGCTGCTTTGGAGATGAACAAGATGATTTCATTACATTCTGATGAGAAAATAAAGAATTATTATGAATCTTGGTTGAAAACACCAAGGTTGTTTCCGTCTGGTAGGTCAACAAGTGATAATTCCTTGGGAATCAGCAATTCTCCGAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAACCTGTGGCGGTTAGAAATGGGGGTGCGAATAAAGTTAATGGGAAGATCACTGTGTTTGCTGGTGCTGAAGAAGGTAGTATAGATATTGAAGTTTGTCTTTCATACGAGGTTTTGGAGGCTTTGGGAAATGACACTGAATTCATGCTTCCTAGTTCTAACTAA 444 0.4077 MIPPLEEDYFGNAALIGVMAMKAGELLECGIGKAALEMNKMISLHSDEKIKNYYESWLKTPRLFPSGRSTSDNSLGISNSPRFDVYGNDFGWGKPVAVRNGGANKVNGKITVFAGAEEGSIDIEVCLSYEVLEALGNDTEFMLPSSN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18215g00002 147 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 142 - -
Trme18215g00002 147 Gene3D - 1 141 IPR023213 -
Trme18215g00002 147 Pfam Transferase family 2 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18215g00002 Trme-Chr18215 918 1361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18215g00002 3 133 Monolignol Biosynthesis Gene Families AT5G48930 24.627 4.20e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18215g00002 - - lja:Lj0g3v0277469.1 202.986