Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme182078g00001 TCACAGAATAACAACTTAGGAGTGCAGGATCAAGTGGCTGAATCAAGTAATAGGAAGAGGATAATTAATGGTCCTCCTGATGTTGTGGTGGAGCGAAGGCAACGTAGAATGTTGAAAAATCGAGAATCTGCTGCTCGTTCTCGTGCAAGAAGACAGGTTTTGTACTCATCATACTCTACTCTTAATTTGTTTCAGCGAATATGCTTCTGTGCAACGTTTAAACCAGTGGTTACCTTCACGGTCGCTTCATGA 252 0.4206 SQNNNLGVQDQVAESSNRKRIINGPPDVVVERRQRRMLKNRESAARSRARRQVLYSSYSTLNLFQRICFCATFKPVVTFTVAS 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme182078g00001 83 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Trme182078g00001 83 SUPERFAMILY Leucine zipper domain 32 56 IPR046347 GO:0003700|GO:0006355
Trme182078g00001 83 Gene3D - 30 58 - -
Trme182078g00001 83 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 53 IPR043452 GO:0003700|GO:0045893
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme182078g00001 1 53 bZIP Transcription Factor Family AT2G36270 58.182 3.68e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme182078g00001 K14432 - gmx:100820370 63.5438