Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme182012g00001 ATGCTTCTCTTCATTTACTCAGACAAACTTCCTGACCTATATGATGTTATGGGCTCAACACCTATGTGCTCTTATACTGTCATGGTGCAGCATCTATTGGCTGCTGCTGATCTCTATAATCTTGACAGGCTAAAAACATTATGTGAATCAAGATTGTGTGAAGAAATCAATACTGAGAGTGTAGCCACAACACTTGCTCTGGCTGAGCAACATCACTGTCCACAGCTCAAGGCAATCTGGGTTTTATTTGGTAGTATAACACAGCCTTCTGATAGATCTAGAATTTACGG 290 0.4069 MLLFIYSDKLPDLYDVMGSTPMCSYTVMVQHLLAAADLYNLDRLKTLCESRLCEEINTESVATTLALAEQHHCPQLKAIWVLFGSITQPSDRSRIYG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme182012g00001 97 Gene3D - 54 85 - -
Trme182012g00001 97 Pfam BTB/POZ domain 1 54 IPR000210 GO:0005515
Trme182012g00001 97 SUPERFAMILY POZ domain 2 55 IPR011333 -
Trme182012g00001 97 Gene3D Potassium Channel Kv1.1; Chain A 1 53 IPR011333 -
Trme182012g00001 97 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 81 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme182012g00001 Trme-Chr182012 36 413 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme182012g00001 BTB 2.6e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme182012g00001 K10523 - mnt:21393699 148.288