Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme181741g00001 ATGGCACCAGAGTATTTAGAAAATGGTATTGTTTCTACAAAGGTTGATGTTTATGCATTTGGTGTGTTGATGTTGGAAATGATTACAGGAAAAGAGGTTGGTTTTATTTTATCAAAAGATGGTGAGAATTTGTTGGATGTTTTGAGTGGAATAGTTGGTAAGGAAAGTTGTGATGAGAAGTTGAAGGAGTTTATGGATTCTTCATTGGAAGGAAATTATCCAATTGAACTTGCTAT 236 0.3347 MAPEYLENGIVSTKVDVYAFGVLMLEMITGKEVGFILSKDGENLLDVLSGIVGKESCDEKLKEFMDSSLEGNYPIELA 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme181741g00001 78 SUPERFAMILY Protein kinase-like (PK-like) 1 61 IPR011009 -
Trme181741g00001 78 Pfam Protein tyrosine and serine/threonine kinase 1 69 IPR001245 GO:0004672|GO:0006468
Trme181741g00001 78 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Trme181741g00001 78 ProSiteProfiles Protein kinase domain profile. 1 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme181741g00001 78 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme181741g00001 Trme-Chr181741 44 279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme181741g00001 1 78 Receptor kinase-like Gene Family AT2G33580 46.988 1.04e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme181741g00001 PK_Tyr_Ser-Thr 1.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme181741g00001 - - gmx:100815842 106.686