Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme181719g00001 AAGGATACTTATGAAGATGATGATGATGTTCATCTTGTTATGGAACTTTGTGAAGGTGGTGAGCTTCTCGATCGTATCGTTGCTAGAGGACATTACACCGAACGCTCCGCTGCTTCTCTCATTAAAACCATCGTTGAAGTTATTCAGGTCATAATCAATCATTCTTAA 168 0.3929 KDTYEDDDDVHLVMELCEGGELLDRIVARGHYTERSAASLIKTIVEVIQVIINHS 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme181719g00001 55 SUPERFAMILY Protein kinase-like (PK-like) 2 51 IPR011009 -
Trme181719g00001 55 Gene3D Phosphorylase Kinase; domain 1 2 16 - -
Trme181719g00001 55 Gene3D Transferase(Phosphotransferase) domain 1 17 51 - -
Trme181719g00001 55 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme181719g00001 Trme-Chr181719 2 169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme181719g00001 1 55 EF-hand Containing Proteins AT2G41860 76.364 2.45e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme181719g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme181719g00001 K13412 - egr:104445156 93.5893