Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18169g00001 ATGGAAAAGAAAAAAGTTACGGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCCGATGGTTTCTTCCTTATAAGCGCAAGCAAAGATGCTAGTCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCGGTTTGGAGTTGTTGCTTGGATGCTAATGCTTTGCGGGCAGCAACTGCTTCGGCTGATTTCTCAAC 254 0.4567 MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFST 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18169g00001 85 SUPERFAMILY WD40 repeat-like 5 83 IPR036322 GO:0005515
Trme18169g00001 85 Gene3D - 8 85 IPR015943 GO:0005515
Trme18169g00001 85 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 7 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18169g00001 Trme-Chr18169 597 1024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18169g00001 9 82 Eukaryotic Initiation Factors Gene Family AT2G46280 39.189 2.86e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18169g00001 K13137 - gmx:100818422 174.481