Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18160g00001 AACCGTTACCGTCCGAGTCCCGAGTTACATCCATTGCCGCCGCTTACGAAGTCTCTCGTCGTCGATTCTCACTCTCCACCGGCGGTGTCTTCGTCGTCGTCGTCGGATAACGATGATAGTCACGAGACGGTGTTTCATTCGCCGCAGGAGACTTCTTCACTAAATCTCAGCCGTGAAGACAGTTTTTACACGACGGTTTCCCGTCAAAGCTCTCTCGCAAACGGAAGTCCAACCGCGCCGGTTGCGGTAACTCCGGTGGTTCCTTTTTCAAAGAGAACTTCACCGAAATCTCGATTTTCTAGTTCTCCGCCGGTGATGATACCACCGATAGGTGGTGGTTCTTCTAGAAGGCCGAAATTCTCATCGCCACCACCGGCACCGAATTTGACGCATCTTCATTCAAACGACTCCATAGCTTCACTTAACCTTCCTCCTCCTCCACCTCCGCCGCCGCCGAGAAATGGTTGGTCACCGGCGGTTATTGCACCATCTTCCTCTGTTTCAAGGAAGCATCATCAACGGTCTCATTCTTCAATTCATGAAGCTGATTCTGCACCTGGTAACAGTTTGAATGTGAAGAAAGCTTTGAAAGAAGAAGATGAAATAGAATTTGATGAAGCAAATGGAAAACCTAAATTGAAAGCTCTTCATTGGGATAAAGTTCGTGCTACTTCAGATCGTGCTACTGTGTGGGACCAATTAAAATCAAGCTCATTTCAGTTAAATGAGGATATGATGGAGACACTGTTTGGTTGTAATTCATCAAATACTGCACCTAAAGCTAAAGAGATGTCTGTTACCAGGAAACCAGTTTTTGCTACTATTGAACATGAGAATAGGGTGTTAGATCCTAAGAAATCACAAAATATAGCTATATTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATG 931 0.4533 NRYRPSPELHPLPPLTKSLVVDSHSPPAVSSSSSSDNDDSHETVFHSPQETSSLNLSREDSFYTTVSRQSSLANGSPTAPVAVTPVVPFSKRTSPKSRFSSSPPVMIPPIGGGSSRRPKFSSPPPAPNLTHLHSNDSIASLNLPPPPPPPPPRNGWSPAVIAPSSSVSRKHHQRSHSSIHEADSAPGNSLNVKKALKEEDEIEFDEANGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSSNTAPKAKEMSVTRKPVFATIEHENRVLDPKKSQNIAILLRALNVTRDEVSEALLD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18160g00001 310 MobiDBLite consensus disorder prediction 23 38 - -
Trme18160g00001 310 Gene3D Formin, FH2 domain 204 310 IPR042201 -
Trme18160g00001 310 MobiDBLite consensus disorder prediction 1 189 - -
Trme18160g00001 310 PANTHER FORMIN-RELATED 4 310 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme18160g00001 310 MobiDBLite consensus disorder prediction 46 78 - -
Trme18160g00001 310 Pfam Formin Homology 2 Domain 208 309 IPR015425 -
Trme18160g00001 310 ProSiteProfiles Formin homology-2 (FH2) domain profile. 203 310 IPR015425 -
Trme18160g00001 310 SUPERFAMILY Formin homology 2 domain (FH2 domain) 144 309 - -
Trme18160g00001 310 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18160g00001 Trme-Chr18160 368 1411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18160g00001 210 310 FH2 protein (formin) Gene Family AT5G67470 77.228 4.33e-43 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18160g00001 - - gmx:100803578 284.648