Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme181474g00001 AAGGAAAAAGAAGAGAATTGGCAGCATGAAGCAGCAGAGGAGGTATCTTTGGAACATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGTACCACATCAACACCAATGACTGAAGAAAGAAATCATGCTATTGCCTATGCAGTAGCAACAGCAGCAGCAGCTGAAGCTGCAGTGACAGCAGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCAGGTTATGGACGTAACTATAAGGAAGAAAADGCAGCAATACTCATTCAATCATACTATAGAGGATACCTAGTAAGTCTTCTTTTATCTATTTTGGTAAAAGTTGTTGATAATTATTTAATATTCACACTCTAA 354 0.387 KEKEENWQHEAAEEVSLEHFPAYSSPDITNEGSTTSTPMTEERNHAIAYAVATAAAAEAAVTAAQAAARVVRLAGYGRNYKEEXAAILIQSYYRGYLVSLLLSILVKVVDNYLIFTL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme181474g00001 117 Pfam IQ calmodulin-binding motif 84 98 IPR000048 GO:0005515
Trme181474g00001 117 PANTHER IQ-DOMAIN 5-RELATED 19 97 - -
Trme181474g00001 117 ProSiteProfiles IQ motif profile. 82 111 IPR000048 GO:0005515
Trme181474g00001 117 MobiDBLite consensus disorder prediction 26 40 - -
Trme181474g00001 117 MobiDBLite consensus disorder prediction 1 16 - -
Trme181474g00001 117 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme181474g00001 Trme-Chr181474 97 450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme181474g00001 8 109 IQD Protein Family AT3G49260 60.952 1.73e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme181474g00001 - - psat:127081873 134.806