Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme181449g00001 AAGGCTCCATCTGCCGCCACCACATCCAACGGTCAGATCCGTTACCGATCTCCATCTTCCACCGAGCTTTTCGACGGTCAGTCCACCTCTCCACCGTCACACGCTACCGATCACCATCCCTCAGAATTCGAATCTGCCAAAATGCTGAAACGTCCTAACCGTCAGGAGTCAATCTCCGATAAGATCTATAGATTCCGAGGAACTCTTCTCGTTGTCTCGATTCCTATCCTTCTCATCACATTCGTTCTCTATATGATGCCTTCGAGTTCCAATTATGAATCTGTCGGAGATTATGCCCTCATTAGTCGCAAAATTGCGCCGGATAAAAAATCCGGTAGCTCTTATGCCGTTATTTTCGATGCTGGTAGCTCCGGCAGCCGCGTTCACGTTTTCCATTTCGATCATAATCTAGATCTTGTTCACATTGGCAAAGATCTCGAACTTTTCGAGCAG 453 0.4746 KAPSAATTSNGQIRYRSPSSTELFDGQSTSPPSHATDHHPSEFESAKMLKRPNRQESISDKIYRFRGTLLVVSIPILLITFVLYMMPSSSNYESVGDYALISRKIAPDKKSGSSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGKDLELFEQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme181449g00001 151 MobiDBLite consensus disorder prediction 1 36 - -
Trme181449g00001 151 Pfam GDA1/CD39 (nucleoside phosphatase) family 111 147 IPR000407 GO:0016787
Trme181449g00001 151 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 57 140 IPR000407 GO:0016787
Trme181449g00001 151 MobiDBLite consensus disorder prediction 1 54 - -
Trme181449g00001 151 MobiDBLite consensus disorder prediction 37 54 - -
Trme181449g00001 151 Gene3D - 103 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme181449g00001 Trme-Chr181449 22 474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme181449g00001 54 151 Calmodulin-binding Proteins AT3G04080 54.082 2.55e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme181449g00001 K14641 - lja:Lj1g3v3945990.2 184.882