Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme181336g00001 ATGGAGTGCAATAAGGACGAGGCTACCAGAGCTAAAGAAATTGCTGAGAGGAAGTTNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAAAGCCCAAAATTTATTTCCTTCCCTTGAGGGTATTCCTCAAATGATAGCAAAACTTGACGTGTATATTTCTGCTGAGAATAAAGTAAAAGGAGAAGCGGATTGGTATGGTATACTTGGTGTGGACCCGCGTGCCGACGATGATACGGTTAGGAAACATTATAGGAAGCTAGCTCTCATGCTTCACC 283 0.3675 MECNKDEATRAKEIAERKXXXXXXXXXXXXXXKAQNLFPSLEGIPQMIAKLDVYISAENKVKGEADWYGILGVDPRADDDTVRKHYRKLALMLH 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme181336g00001 94 Gene3D DnaJ domain 51 94 IPR036869 -
Trme181336g00001 94 PANTHER BNAC03G44070D PROTEIN 1 94 - -
Trme181336g00001 94 Coils Coil 33 37 - -
Trme181336g00001 94 CDD DnaJ 66 94 IPR001623 -
Trme181336g00001 94 Coils Coil 5 18 - -
Trme181336g00001 94 Pfam DnaJ domain 66 94 IPR001623 -
Trme181336g00001 94 SUPERFAMILY Chaperone J-domain 58 94 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme181336g00001 Trme-Chr181336 1 283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme181336g00001 4 94 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.082 1.38e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme181336g00001 - - tpra:123911521 150.599