Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18130g00001 ATGAGGTTTCTTCTACAGGGAGTTGGAAATACACTCAAGAGACATTATGAAACTTACCTTTTAGAATATGAATTAGCACATGATGATGTGGATGGAGAATGCTGCTTGTTGTGTCACAGTAGTGCTGCTGGGGATTGGGTGAATTGTGGCATTTGTGGTGAGTGGGCCCACTTTGGCTGTGACAGAAGGCAGGGTCTTGGTGCATTTAAGGATTATGCAAAAACAGATGGGCTGGAATATATATGTCCTCATTGTAGTGTTACGAATTTCAAGAAAAAACAAAGTGTTGCTAATGGGTATTCTCAAGGGGCAATGTCATCACGACCGCTTTGA 333 0.4204 MRFLLQGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKQSVANGYSQGAMSSRPL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18130g00001 110 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 6 107 IPR042293 -
Trme18130g00001 110 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 94 IPR013083 -
Trme18130g00001 110 SUPERFAMILY FYVE/PHD zinc finger 15 89 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18130g00001 5 99 ARID Transcription Factor Family AT3G43240 82.292 2.97e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18130g00001 - - gmx:100816540 229.95