Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18085g00001 AAGGAATTTATCGATGCTAAGTTTTCATGTATAAGATATGGTAATAAGCAACAATCGGACGATGCTATTAATCCACGTCCTTCGCCGAAAATCGGTTGTAAAGCAAGTTTGCATGTGAAGAGAAGACAAGATGGTAAATGGTATGTTTATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTCTTTCGAAGTCATAGGAATTCGGATCCGTTAAGTAATGATGTGCGGATGCGACGGAGGAAGAACTCAACTGCAGGTGTTGATTTGAATGAAGAGCATCGACTTAGAAATGTGTTTTGGGTTGATTCTAAAGGGTTGGAAGATTTTGGTTATTTCTCGGATGTTGTTTCTTTTGACACAACATATTTTACAAGCAAATATAAAATACCATTGGTGCTTTTCGTTGGAGTTAACCATCATATGCAACCAACATTGCTTGGATGTGCATTGATAGCTGATGAGACGGTATTTACTTTTGCTTGGTTACTGCAAACGTGGTTTATAGCAATGGGGGAACGTGCTCCACAAGTGATTCTGACCGACCAAAACGATGCTCTTAAAGCTGCTGTCGCTGCTAGGACCAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATATTAAGTGGGTCCAATCCTTGTATGATGATCGAGCAAGTTGGGTGCCAACTTTTATGA 708 0.3941 KEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASLHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRNSDPLSNDVRMRRRKNSTAGVDLNEEHRLRNVFWVDSKGLEDFGYFSDVVSFDTTYFTSKYKIPLVLFVGVNHHMQPTLLGCALIADETVFTFAWLLQTWFIAMGERAPQVILTDQNDALKAAVAARTNLKRDGGSWLIGLNLEILSGSNPCMMIEQVGCQLL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18085g00001 235 Pfam FAR1 DNA-binding domain 2 62 IPR004330 -
Trme18085g00001 235 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 198 IPR031052 GO:0006355
Trme18085g00001 235 Pfam MULE transposase domain 121 198 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18085g00001 Trme-Chr18085 1 1006 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme18085g00001 MULE 3.7e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18085g00001 - - gmx:100805273 354.369