Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme180682g00001 ATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTACACAGAAGAGGAGGTAAAGGCTATGGCTGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTG 127 0.4646 MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRP 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme180682g00001 42 PANTHER CYTOCHROME C1 1 42 IPR002326 GO:0009055|GO:0020037
Trme180682g00001 42 SUPERFAMILY Cytochrome c 2 42 IPR036909 GO:0009055|GO:0020037
Trme180682g00001 42 Pfam Cytochrome C1 family 1 42 IPR002326 GO:0009055|GO:0020037
Trme180682g00001 42 Gene3D - 1 42 IPR036909 GO:0009055|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme180682g00001 1 42 Chloroplast and Mitochondria Gene Families AT5G40810 97.619 2.57e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme180682g00001 K00413 - rcu:8271381 85.8853