Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18065g00001 ATGAGGTATAGAGAAGCTCTTAGCAATGCTTCATGTCCTAATTGTGGTGGTCCTACAGCTATAGGTGAAATGTCTTTTGATGAACATCATTTGAGGCTTGAAAATGGAAGGCTAAGGGAAGAGATCGATCGAATTTCAGCAATCGCAGCCAAATACGTAGGAAAGCCGGTGGTAAACTATTCAAACATTTCACCATCACTCCCACCTCGTCCAGAAATTGGTTTTGTTGGTAACAACCAAGGAATTGGTGGTATGGAAATGTATGGAACAAGTGGAGATATTCTAAGGTCAATCAGTGGACCTACTGAAGCAGATAAACCAATAATAATAGAATTAGCTGTTGCAGCTATGGAAGAACTCATTGGTATGGCACAAATGGGTGATCCACTTTGGTTAAGTACTACCCTTGATGGAGCTGGTACTGTTCTTAATGAAGATGAATATGTTAGGTCATTTCCTCGTGGAATTGGACCTAAACCTAATGGATTTAAGTGTGAAGCTTCTAGAGAAACTAGTGTTGTTATCATGAATCATGTTAACCTTGTTGAGATTCTCATGGATGTG 564 0.3972 MRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENGRLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPEIGFVGNNQGIGGMEMYGTSGDILRSISGPTEADKPIIIELAVAAMEELIGMAQMGDPLWLSTTLDGAGTVLNEDEYVRSFPRGIGPKPNGFKCEASRETSVVIMNHVNLVEILMDV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18065g00001 188 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 188 IPR042160 -
Trme18065g00001 188 Pfam START domain 112 187 IPR002913 GO:0008289
Trme18065g00001 188 ProSiteProfiles START domain profile. 102 188 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18065g00001 Trme-Chr18065 81 1345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18065g00001 2 188 Homeobox Transcription Factor Family AT4G04890 69.634 3.47e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18065g00001 K09338 - gmx:100790101 322.398