Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme180541g00001 ATCTACATGGTTGGTGATAGCTCGGGCGGGAACATTGTGCACCATGTTGCGTTGAAAGCTTTAGACTCTGGAGTTCAGGTTTTGGGGAATATACTGCTCAATCCATTGTTTGGTGGGGAAGAAAGAACAGAATCTGAAAAGCGTCTCGATGGGAGGTATTTTGTTAGAGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGAAGANNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAAGGGGTTACCTTTCCTAAGAGCCTTGTCGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGTTATGCCAAAGGGCTTGAGAAAGCCGGACAAAATGTGAAGTTGCTATTTCTAGAGCAAGCCACGATTGGATTTTACTTGCTGCCAAATAATGAGCATTTCTCTCTTGTCATGGATGAGATAAAACAATTTGTCAACTT 476 0.3887 IYMVGDSSGGNIVHHVALKALDSGVQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEXXXXXXXXXXXXXXXXXEGVTFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATIGFYLLPNNEHFSLVMDEIKQFVN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme180541g00001 158 Gene3D alpha/beta hydrolase 1 158 IPR029058 -
Trme180541g00001 158 Pfam alpha/beta hydrolase fold 1 138 IPR013094 GO:0016787
Trme180541g00001 158 PANTHER ARYLACETAMIDE DEACETYLASE 1 132 - -
Trme180541g00001 158 SUPERFAMILY alpha/beta-Hydrolases 1 157 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme180541g00001 Trme-Chr180541 1 476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme180541g00001 1 158 Carbohydrate Esterase AT3G05120 68.354 9.17e-76 228