Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18040g00001 CCTCATCTCACTTCCAAACCCACGGAATCAGAGGCTTTCTCTGCACGTGCAAGTTCCAAGTGTTACAGAGCCTGCCCTGGAAAGTGCACATGCAATCACAAGCATCTCATAGACATACAGAAAAAAGAACTTCAGGATCTCAAGGCTTTGAAGTTGAAAGTTAAGAATGAGTTTGAAGAGATGCAATCACAGTTTCAGAAATTTTTCAATGATATAGGAAGTCAAGTAAATGAGATGTCAACCAAAGCTCTTGGTTATCACAAAGTAGTAGAAGAGAACAGAAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGACCTGCATTCAGTTCCGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGACGGTTCTCTATTCATTATAGATCCATCTAAAACACTAAAAGATGGAAGAAAACTTTTTCAATTTAATCGGATTTTCGGTCCAACAGCTGGCCAAGACGAGGTTTATAGAGACACTCAACCTTTAATTAGATCCGTGATGGATGGATACAATGTTTGTATTTTTGCTTATGGTCAAACGGGATCTGGGAAGACTCACACCATGAGCGGTCCTTCCGACGGAACATCCAAGGATATGGGGATCAATTATCTGGCTCTCAATGATTTGTTTCAAATGTCTAATGAA 675 0.3926 PHLTSKPTESEAFSARASSKCYRACPGKCTCNHKHLIDIQKKELQDLKALKLKVKNEFEEMQSQFQKFFNDIGSQVNEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFSSESKNVVDFIGEDGSLFIIDPSKTLKDGRKLFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSDGTSKDMGINYLALNDLFQMSNE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18040g00001 225 Gene3D Kinesin motor domain 48 225 IPR036961 -
Trme18040g00001 225 SMART kinesin_4 104 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme18040g00001 225 ProSiteProfiles Kinesin motor domain profile. 106 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme18040g00001 225 Pfam Microtubule binding 92 212 IPR031852 GO:0008017
Trme18040g00001 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 224 IPR027417 -
Trme18040g00001 225 Coils Coil 37 64 - -
Trme18040g00001 225 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 225 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18040g00001 Trme-Chr18040 1 1413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18040g00001 42 200 Calmodulin-binding Proteins AT5G65930 38.415 9.19e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18040g00001 K10406 - gmx:100786642 382.104