Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme180330g00001 GACCAAGAGCTTTTCTCAACATCTGGTGCCGATACCATTAGCATTGTCAACAAGTTTAGCGCAGATCAAAACACCTTTTTTGAGAGCTTTAAGGCTGCTATGGTGAAAATGGGCAATATTGGTGTGCTTACTGGTACCAAAGGAGAGATCAGAAAACAATGCAACTTCATTAATCCAAAATTAGCAGAACTTGGTTTACCCACAATGACTCAAGAATCATCAGAGGATGGTATTATTAGCTCAATATAA 249 0.3855 DQELFSTSGADTISIVNKFSADQNTFFESFKAAMVKMGNIGVLTGTKGEIRKQCNFINPKLAELGLPTMTQESSEDGIISSI 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme180330g00001 82 PANTHER PEROXIDASE 72-RELATED 1 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme180330g00001 82 SUPERFAMILY Heme-dependent peroxidases 1 59 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme180330g00001 82 Gene3D - 38 58 - -
Trme180330g00001 82 Gene3D Peroxidase, domain 2 1 37 - -
Trme180330g00001 82 ProSiteProfiles Plant heme peroxidase family profile. 1 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme180330g00001 Trme-Chr180330 2 250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme180330g00001 1 82 Peroxidase AT2G38380 48.780 1.40e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme180330g00001 K00430 - gmx:100804765 118.242