Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme180213g00001 ATGGGGTTTTTCATTTGTTTTTTGTTTCAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTACTCATTGTTCGCAAGTGCTTCCAACTTAATAACAGACAATCGCCGAGGTTTTCCGTACAATGTACAACAAGGAACTTCTATGTCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAACATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATTATGACCACAGCAACCACACTAGATAACACAAAAATGCCAATTCAGGATGCATTTG 292 0.4178 MGFFICFLFQPDVTAPGVNILAAYSLFASASNLITDNRRGFPYNVQQGTSMSCPHVAGIAGLLKTKHPNWSPAAIKSAIMTTATTLDNTKMPIQDAF 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme180213g00001 97 Gene3D Peptidase S8/S53 domain 9 93 IPR036852 GO:0004252|GO:0006508
Trme180213g00001 97 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 95 IPR045051 -
Trme180213g00001 97 SUPERFAMILY Subtilisin-like 10 89 IPR036852 GO:0004252|GO:0006508
Trme180213g00001 97 Pfam Subtilase family 9 88 IPR000209 GO:0006508|GO:0008236
Trme180213g00001 97 ProSitePatterns Serine proteases, subtilase family, serine active site. 48 58 IPR023828 -
Trme180213g00001 97 ProSiteProfiles Serine proteases, subtilase domain profile. 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme180213g00001 Trme-Chr180213 1 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme180213g00001 8 95 Subtilisin-like Serine Gene Family AT5G59810 56.818 3.65e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme180213g00001 - - tpra:123892266 164.466